ACCESS Resource Provider Software Discovery

intel-oclfpga v2023.2.1

Module: intel-oclfpga/2023.2.1

ncdu v 2.5

Module: ncdu/ 2.5

Ncdu is a disk usage analyzer with an ncurses interface.

Domain: Other

orca v6.1.0

Module: orca/6.1.0

An ab initio, DFT and semiempirical SCF-MO package

cutadapt v 2.10

Module: cutadapt/ 2.10

cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.

Domain: Biological Sciences

Keywords: singularity bioinformatics

bazel v3.7.1

Module: bazel/3.7.1

Bazel is an open-source build and test tool similar to Make, Maven, and Gradle. It uses a human-readable, high-level build language. Bazel supports projects in multiple languages and builds outputs for multiple platforms. Bazel supports large codebases across multiple repositories, and large numbers of users.

Domain: development

Keywords: bazel

xdusage v2.1-2

Module: xdusage/2.1-2

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Domain: Utilities

Keywords: xdusage

aocc v2.3.0

Module: aocc/2.3.0

The AOCC compiler system is a high performance, production quality code generation tool. The AOCC environment provides various options to developers when building and optimizing C, C++, and Fortran applications targeting 32-bit and 64-bit Linux platforms. The AOCC compiler system offers a high level of advanced optimizations, multi-threading and processor support that includes global optimization, vectorization, inter-procedural analyses, loop transformations, and code generation. AMD also provides highly o

Domain: compilers

Keywords: clang clang++ flang AMD

bbmap v 39.01

Module: bbmap/ 39.01

This package includes BBMap, a short read aligner, as well as various other bioinformatic tools.

Domain: Biological Sciences

Abinit v 10.4.7

Module: Abinit/ 10.4.7

Ab initio molecular dynamics.

Domain: Materials Sciences

Keywords: molecular dynamics density functional theory

openblas v0.3.13

Module: openblas/0.3.13

OpenBLAS: An optimized BLAS library

Domain: libraries

Keywords: BLAS GNU

intel v20.4.0

Module: intel/20.4.0

Intel MPI Libraries.

Domain: libraries

Keywords: mpicc

zoltan v3.83

Module: zoltan/3.83

The Zoltan library is a toolkit of parallel combinatorial algorithms for parallel, unstructured, and/or adaptive scientific applications. Zoltan's largest component is a suite of dynamic load-balancing and partitioning algorithms that increase applications' parallel performance by reducing idle time. Zoltan also has graph coloring and graph ordering algorithms, which are useful in task schedulers and parallel preconditioners.

Domain: Data management services for unstructured adaptive and dynamic applications

octave v 10.2.0

Module: octave/ 10.2.0

GNU Octave is software featuring a high-level programming language, primarily intended for numerical computations.

Domain: Other

Keywords: singularity utilities

gent v 1.0.0

Module: gent/ 1.0.0

This program computes the cross entropy for groups of sequences that have been assigned to groups on the basis of biochemical, physiological, or other biological property. The sequence assignments are cross-validated, again by the cross entropy measure, to check for problems with the alignment or group assignment.

Domain: Biological Sciences

Keywords: singularity utilities

ncdu v 1.15.1

Module: ncdu/ 1.15.1

Ncdu is a disk usage analyzer with an ncurses interface.

Domain: Other

comsol v6.4

Module: comsol/6.4

The comsol/6.4 modulefile defines the default system paths and environment variables needed to use the contents of the comsol/6.4 package.

Domain: Finite elements

LAMMPS v 27Oct21

Module: LAMMPS/ 27Oct21

Classical molecular dynamics.

Domain: Materials Sciences

Keywords: molecular dynamics

openmpi v3.1.5-nvhpc21.7

Module: openmpi/3.1.5-nvhpc21.7

Purpose ------- The modulefile defines paths and environment variables for using OpenMPI 3.1.5 built with the NVidia HPC SDK 21.7 compilers.

Domain: libraries

BLAST+ v 2.9.0

Module: BLAST+/ 2.9.0

BLAST (basic local alignment search tool) is an algorithm and program for comparing primary biological sequence information, such as the amino-acid sequences of proteins or the nucleotides of DNA and/or RNA sequences.

Domain: Biological Sciences

Keywords: singularity bioinformatics

gcc v10.2.0

Module: gcc/10.2.0

The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Ada, and Go, as well as libraries for these languages.

Domain: compilers

Keywords: gcc g++ gfortran GNU

BLAST+ v 2.11.0

Module: BLAST+/ 2.11.0

BLAST (basic local alignment search tool) is an algorithm and program for comparing primary biological sequence information, such as the amino-acid sequences of proteins or the nucleotides of DNA and/or RNA sequences.

Domain: Biological Sciences

Keywords: singularity bioinformatics

QuantumEspresso v 7.2

Module: QuantumEspresso/ 7.2

Quantum ESPRESSO is an integrated suite of computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials (both norm-conserving and ultrasoft).

Domain: Materials Sciences

Keywords: DFT ab initio pseudopotential

python v2.7.18

Module: python/2.7.18

The Python programming language.

Domain: programming language

Keywords: python python2

Anvi'o v 7

Module: Anvi'o/ 7

Anvi'o is an open-source, community-driven analysis and visualization platform for microbial 'omics.

Domain: Biological Sciences

Keywords: singularity bioinformatics

AmberTools v2024

Module: AmberTools/2024

molecular dynamics software

Keywords: AmberToolsl